Make Pages package size and history retention system-configurable, support
zip/tar.gz/tar.xz/tar.bz2/tar/7z uploads, prune history with clear keep-N
semantics, and rebind agent config to the live active Pages deployment so
main-config rollback never depends on pruned packages.
-transition `of_config_versions` primary key from `id` to `version` string.
-add database migration files `202606270001_make_version_primary_key.sql` for PostgreSQL and SQLite.
-introduce AfterFind/AfterCreate GORM hooks to preserve JSON backward compatibility.
-refactor API controllers, logics, and front-end typescript definitions to receive `string` parameter.
- Merge all files inside openflare-server to the repository root directory.
- Relocate agent, relay, and flared subprojects from internal/ to internal/apps/.
- Combine docker-compose files and update build context paths to root.
- Update GitHub workflows and Dockerfiles to refer to new directories and package names.
- Rewrite Go package imports across all files.
- Resolve database renew test race condition and clean up docs.
ryan